Browse of TCMCG075C16420 protein

CDS

Accession Number	TCMCG075C16420
gbkey	CDS
Protein Id	XP_017976626.1
Location	complement(join(22813274..22813881,22815264..22815632,22815920..22817024,22818071..22818366,22819542..22819620,22819745..22819832,22821383..22821530,22821612..22821879,22822100..22823470,22823827..22824096,22824799..22825033,22825940..22825999,22826444..22826773,22826917..22826995,22827101..22827180,22827288..22827365,22830001..22830081,22830164..22830251,22830462..22830548,22830670..22830818,22830951..22831024,22832083..22832106))
Gene	LOC18598720
GeneID	18598720
Organism	Theobroma cacao

Protein

Length	1988aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA341501
db_source	XM_018121137.1
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 13 isoform X1 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTTTTTAGAATCGGAGGTCTAAGTCAAATATCATGGTTCCAGTTTCTACCAGTTGAGTCTGATTTAAACGCTCTGCCAGACAAAAGGCTGCACAGCATAAAAGCAGAGCAGAAAGATGCTGCTACGTTGCTAGTTCTCTCATCCCACCTGCAGCTGCAGAAGGAAGGATTCCTCAGTACATGGACCAATTCCTTTGTTGGGCCATGGGATCCATCTCAAGGTCTGCATAATCCAGATGAGAAAATTAAGCTGTGGCTTTTCATCCCGGGACGTCATGTATCTGTCCAGGAATCAGCTCAATCTGCAGTGTCCAGGTTAAGAGTTGTCGCTTCTGGACTTTGGTTGGCTCCTGGTGACTCAGAAGAGGTTGCTGCTGCCCTTTCTCAGGCTTTAAGGAATCACATAGAAAGGGCACTTCATGGATTCTCCTACATGAGATTTGGTGATGTATTTTCAAAGTATCATCCTCCTCAAATTGAAGAATGTTTCAGGAGAGCACAGCCTACAGTTGAGTTCATCTTTGCCGCTACTCAAGAATCAATTTTTGTACATGCCATAATATCCTCAAAGCATATCCGAGCACTTTCAACTAGTGACATAGAAAAAGTTCTAGAGCATTCTTCCAAAAATTCCAGTTACTTGCTTCCTGTGATAATTTCCCCGCATGGAATGCGTGGTAGGCTTTCAGGATGTAGTCCAAATGATCTTGTCAAGCAAGTCTATTTCAGCGGCTCTGGCAAAATTAGGACCTTTAATGGTTTTATAGGTCTACCATATCATACTTCTCAAGGTTCTGGTTGCCAGTTATGGGGCCAAAACTGCTATGTTAAAGTTACTCTTGGTTGCTCAAAATCTGGAAGTGACAAGGCATTAAACTCAAACGCCAATATCAGGAATTTACCCAAGCATCATCCTACTGAAGCTTCTGCAGCAGGAAGAGATGATCAGAAGGGATCACTTGATCTCTTATCTGTACTTGAAAAAACATTTATCTATCCATCTGAAGCTGTGCTTGTCCCAGTCTTGCAAACATCCTTTGCGAGATCCTCTTTGAGAAGATTCTGGTTACAAAATTGGATAGGACCTTCGTTGGCTGCTTCGTCTTTACTTAGGCATTGTGATGGCAATATAGATTCCATGGAAAGATCTTGGGTTGAATTCAGTGGAATACACACACAGCACTGTTATAACAGCAGCAGCAATAGTAATAATAGCAGCATAAGTTCCATAAGCAGTAGTTCCAGTGATAGTGTGACCACAGGAGCTCGTGACCTTGAGGCAGATGCAGATTCATCATGTAGACAGTCAGGCTTATCTTCTAATGATCAGATGGAGATTGATTGCCTAAAAATGGGTTCCAAGCGTCCTCGAATTGGGATTACAGAGTCGTATGGTCAAGCGATTACAGTTACGAATGCTTCATCTCAAGATGCATACAAGTCTAATATTGGTTCCATGGAAGTTAACCATTCAGCCATTACAGCCGTTGGAAATGATCAAATTGGATCTAATTGGGATTGGGATGATGATGACAGAGGAATTGTCATGGATATCCAATCTCTTCTTTCTGAATTTGGAGATTTTGGTGACTTCTTTGAAAATGATGTACTTCCATTTGGGGAGCCCCCAGGAACTGCAGAGTCGTCGGCAATTATGTTTGCTGCTCCAGATTGTGGAGATGCAGGAAGCAGTCCAGCTGGGGTAATGGATGTTTCAGATCAGATGCTTTTGCCTGTATGTCTTCCTTCCTTTGATAGCTTTACTCCACATCCTCCAGTGGCCATAGAGGAGTGTTTGAGCAAAAGTCAAGAGGTCACAAGCAGTGCTGTCACATCTGGTCCATTGAACCACACTTTAGCTTCTTCTACTGGTGAGTTTGATCATTTAATGAAAGCTGAAGCACTGATGACATTTGCAACAGAATATGGAGCAGTAGAAACTCCTGCAAGTGATTCGTCATCAATTTTCAAAAAACCATATCTCCCAAAGTCTCACAAAGCAGAGAGTTCTAATTCAAGCCCAAACAATTACATATATGGTGCAACACCGCCCTCTTCTCCTTGCTTTGATGGATTAGATGAGAAGACTGGCATGCCTATGAATCTGAAAGCCTACCCTGGAGGGCATGATTTGAGTGCCACGTACCAACTCAAGAAATATTACACTCCTGTGGAGACCAGGAAAGAGAGATATGATGGGAAATTGCTTACACATAATGATAGCAGTGCTACGAATGAGGTTTCAGGAACATCTCAGTTTGCTAATTTTAATTCAATGAATGCAGTTAAATCTGCTGACAGGAAAATGACACAGGGCATATGTGGCAAAGAGCATATCCTTTTATCTATGAAGACTGTGCTTGCAACTGATGTGGAATGTGCTATGTTCCAAGCTTCCATGTTGAGGATGCGACACATACTTTTATCTCCCATGAGCCTTGCAACTATTAGCTTGAGTAGGCCTGCAGGAAGGTCTGTTTTAAACCATCTTCCTGGTGACCCTAGTAGTATGACAGACAATGTATCTAGCAGGTATGAGGTGAAGAAGAAAGAATCTATACCTGTCAGAATTGCTGGTGATATTGATGGAGGAATGCTAGATGGGCACCTTAATGCTCCTGTTGGTGTATGGCGCACTGTTGGAGTTCCAAAAGTTTCAAAGCCTGCTGCGTCACCGAGTATTGAAGCCAGCCCATCCTTAACCCATAATTCATTTAATGAGGATAGTATCCTCTCTTATGGGCAAAGGCAACCGCTTCAAGAGCTTCTGGATGGCATTGTGTTACTGGTCCAGCAAGCTACTTCCTTTGTTGATTTGGTACTGGATGCAGATTGTGGTGATGGTCCTTACAGTTGGCTTGCATTACAAGAGCATTGGAGGCGAGGATTTTGTTGTGGGCCTTCCATGGTCCATGCAGGTTGCGGAGGGACTTTGGCTTCTTGCCATTCCTTGGACATTGCTGGTGTGGAGTTAGTAGATCCACTTTCTGCTAATATTCATGCTTCTTCTGTAATCAGTTTGCTGCACTCTGACATCAAATCAGCCTTAAAATCTGCATTTGGCAATTTAGATGGTCCTTTGTCTGTCACTGACTGGTGCAAAGGCCGTGGTCAATCAGGTGATGTTGGAGCCTCTGCTGATGGATCATCTGCTGAGTCCAATACAAATGAGTGCCGAGATTCTTCAACTACCGTAACTCACTCTGTGGGAGAAGCAATGAGTCCATCTCAAACTTCTGTTGGTGGGTCATCTGTCCTTAAAGTGACTGGTGCATTGGATGGAGGTAAAGTTGAAGAGACCAGCCAAAGGAGACTGAACCAAGAAATCTCTGGTTCTGAGTCAGAGCAACAACAGTGCACCCGGCTAAGACCAACACTTTTTGTTCTCCCATCACCTGCAATACTTGTTGGGTACCAGGATGATTGGCTTAAAACTTCAGCAAACTCTTTGCAGCTTTGGGAAAAGGCTCCTCTTGAGCCATATGCTCTACCAAAACCTATAATTTATTCTGTTATATGCCCAGATATTGATCCCCTTACTTCTGCCGCTGCTGATTTTTTCCAACAACTAGGAACTGTATATGAGACATGCAAACTGGGAACCCACTCACCTCAGAGTTTGGGAAACCAGATGGAGATGGACTCAGGGAAATGGTCTTCTTCTGGCTTTGTCCTACTTGATTGCCCCCAATCAATGAAGATAGAAAGCAGTAATGCATCTCTCCTAGGATCAATAAGTGATTATTTTCTTTCTCTGTCAAATGGATGGGACCTGGCTTGCTACCTCAAGTCTCTTTCTAAGGCACTTAAAGCATTGAAACTTAGCCAATTTTTGTCTACAAACCAAAAGGAAGGAATAAGCGGCCCTTGCATGGTAATATATGTGGTGTGCCCCTTCCCTGAGCCTACCGCAGTCCTAAAAACAGTTGTCGAATCTTCTGTTGCTATTGGATCAATTATTCTGCCCTCAGATAGAGAAAGGAGATCTGTATTGTACAGTCAGGTGGGGAAGGCATTAAGCAGCTCAGCAGCAGCAGATGAAGCATCGATATCAAATATTCCAGTAGTTTCAGGCTTTAGTGTTCCTAAATTGGTACTACAGATTGTGACAGTTGATGCCATTTTTAGGGTTACAAGCCCACCTTTTAATGAACTTGTCATTCTGAAGGAGACAGCTTTCACTATATACAACAAAGCTCGGCGAATTTCACGAGGATCCACGAATGATGTAAGCCTGTCATCATCACTATCTAGTAGACCTCATTCTGTCTTGACTCCTATGACATCTATTCCAGGAATGTGGAAGGATTGTGTTGGTTCTCGAATCCCAGGGTCTTCTCTTCCTAGAGAGGGTGAAATTGATTCCAGCTTGAGGGGTGGTGCTTGGGACAATTCATGGCAAACGTCAAGAGCAGGAGGATTAAGTTGTGATCCAAACAGAAATGGGGATTTCTTCTATCAAGATGAAGTTTGCTACATGTTTGAACCACTTTTTATTCTTGCAGAGTCTGGTTCTGTGGAGCATGGAATTTCACCGACAGCTTTTGGTAATTCAACCTCTGAATCTTCAAAGACAGTATCGGATGAAAGTAGTGGAGCCTTCATGCAGACTGCAAATTCAGCAGGAAGTATTGATCCTGGCTCAGGCTCTCAGCTGGATGGATCGGAGTCTGATGGTGTTAGTTCTGGTAATAACAAGACTCCAAGCTTACATTGCTGCTATGGATGGACAGAAGATTGGCGGTGGCTGGTATGCATCTGGACCGATGCAAGGGGGGAATTGCTTGACTGCGACATATTCCCATTTGGGGGAATTAGCAGTAGACAGGACACGAAAGGTCTACAATGCCTTTTTGTACAAGTTCTGCAGCAAGGCTGTCAAATACTTCAGACATGTGCTTCTCCTGATACTGGTGTTGTCAAGCCTAGAGACTTTGTGATTACTCGCATTGGAAATTTCTATGAGCTTGAATACCTAGAGTGGCAAAAAGCCATCTATTTAGTTGGTGGATCTGAGGTGAAAAAATGGCCTCTACAGTTGCGCAGATCTGTTCCTGATGGCATGCCTACTAGCACAAATGGAACTTCTTTGCAGCAGCAGGAGATGAGTTTGATTCAAGATAGAACTCTGCCTTCCTCACCGAGTCCTTTGTACAGCCCACACACAAAAGCTGGTTTCATGAAAGGTGGTTTAGGACAACCTGCTGCAAGAAAACAGCTTATGGGTGGACATACATTAGTTGACAGCTGCAGGGGATTGCTTCAGTGGGTGCAGAGTATCAGCTTTGTTTCAGTTTCAGTTGACCATTCTTTACAGCTAGTGTTCCAAGCAGATTCACTGTCTCCTGGAACTCAGGGTGTTAGTGGTATGGGTCAATCAGGCTACATAGAAGGGTTCACTCCTGTGAAATCTCTGGGTTCAACATCCGCTTCTTACATGTTAATCCCATCACCTAGCATGCGCTTCCTACCTCCAACACCTCTTCAGCTCCCAGTATGTCTCACTGCTGAATCACCACCGCTTGCTCATCTTCTACACAGCAAGGGCTCTGCCATCCCCCTTTCTACCGGTTTTGTGGTTTCAAAGGCTGTACCTTCTGTGAGGAAAGACTATAGAAATTACACAAAAGACGAATGGCCTTCAGTTCTTTCCGTCAGTCTCATTGATTATTGTGGAGGTAATAATGTTAGCCAAGATAAAGTAATCAGAGGAATTGCAAAGCAGGCAGGAAGGACTTTGAGCTCTGAAGCTAGAGATTTTGAAATTGATAACCATTTGATTTTGAAGTCTGTAGCAGCGGAGCTTCATGCTCTGTCATGGATGACAGTTAGTCCAGGATACTTGGAGCGGCGAACTGCACTGCCCTTCCACTGTGATATGGTTTTGAGATTGAGGAGATTGCTCCATTTTGCTGAAAAGGAGCTCTCTCGGCCACCGGATAAGACACAAGTTTAA

Protein:   MWTNVFRIGGLSQISWFQFLPVESDLNALPDKRLHSIKAEQKDAATLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHVSVQESAQSAVSRLRVVASGLWLAPGDSEEVAAALSQALRNHIERALHGFSYMRFGDVFSKYHPPQIEECFRRAQPTVEFIFAATQESIFVHAIISSKHIRALSTSDIEKVLEHSSKNSSYLLPVIISPHGMRGRLSGCSPNDLVKQVYFSGSGKIRTFNGFIGLPYHTSQGSGCQLWGQNCYVKVTLGCSKSGSDKALNSNANIRNLPKHHPTEASAAGRDDQKGSLDLLSVLEKTFIYPSEAVLVPVLQTSFARSSLRRFWLQNWIGPSLAASSLLRHCDGNIDSMERSWVEFSGIHTQHCYNSSSNSNNSSISSISSSSSDSVTTGARDLEADADSSCRQSGLSSNDQMEIDCLKMGSKRPRIGITESYGQAITVTNASSQDAYKSNIGSMEVNHSAITAVGNDQIGSNWDWDDDDRGIVMDIQSLLSEFGDFGDFFENDVLPFGEPPGTAESSAIMFAAPDCGDAGSSPAGVMDVSDQMLLPVCLPSFDSFTPHPPVAIEECLSKSQEVTSSAVTSGPLNHTLASSTGEFDHLMKAEALMTFATEYGAVETPASDSSSIFKKPYLPKSHKAESSNSSPNNYIYGATPPSSPCFDGLDEKTGMPMNLKAYPGGHDLSATYQLKKYYTPVETRKERYDGKLLTHNDSSATNEVSGTSQFANFNSMNAVKSADRKMTQGICGKEHILLSMKTVLATDVECAMFQASMLRMRHILLSPMSLATISLSRPAGRSVLNHLPGDPSSMTDNVSSRYEVKKKESIPVRIAGDIDGGMLDGHLNAPVGVWRTVGVPKVSKPAASPSIEASPSLTHNSFNEDSILSYGQRQPLQELLDGIVLLVQQATSFVDLVLDADCGDGPYSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLHSDIKSALKSAFGNLDGPLSVTDWCKGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSVGEAMSPSQTSVGGSSVLKVTGALDGGKVEETSQRRLNQEISGSESEQQQCTRLRPTLFVLPSPAILVGYQDDWLKTSANSLQLWEKAPLEPYALPKPIIYSVICPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQSLGNQMEMDSGKWSSSGFVLLDCPQSMKIESSNASLLGSISDYFLSLSNGWDLACYLKSLSKALKALKLSQFLSTNQKEGISGPCMVIYVVCPFPEPTAVLKTVVESSVAIGSIILPSDRERRSVLYSQVGKALSSSAAADEASISNIPVVSGFSVPKLVLQIVTVDAIFRVTSPPFNELVILKETAFTIYNKARRISRGSTNDVSLSSSLSSRPHSVLTPMTSIPGMWKDCVGSRIPGSSLPREGEIDSSLRGGAWDNSWQTSRAGGLSCDPNRNGDFFYQDEVCYMFEPLFILAESGSVEHGISPTAFGNSTSESSKTVSDESSGAFMQTANSAGSIDPGSGSQLDGSESDGVSSGNNKTPSLHCCYGWTEDWRWLVCIWTDARGELLDCDIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQTCASPDTGVVKPRDFVITRIGNFYELEYLEWQKAIYLVGGSEVKKWPLQLRRSVPDGMPTSTNGTSLQQQEMSLIQDRTLPSSPSPLYSPHTKAGFMKGGLGQPAARKQLMGGHTLVDSCRGLLQWVQSISFVSVSVDHSLQLVFQADSLSPGTQGVSGMGQSGYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLQLPVCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDYRNYTKDEWPSVLSVSLIDYCGGNNVSQDKVIRGIAKQAGRTLSSEARDFEIDNHLILKSVAAELHALSWMTVSPGYLERRTALPFHCDMVLRLRRLLHFAEKELSRPPDKTQV